Ausgewählte Publikationen

Publications

2018

Pümpin, Ch., Abarca N., Jahn R., Wuttke M., Vrydaghs L., Reifarth  N. (in prep.) Evidence of diatoms and spicules of sponges in the Royal Tomb of Qaṭna, in: N. Reifarth – Ch. Pümpin (eds.), Taphonomic Studies on Burial Processes in the Royal Tomb and Tomb VII in Qaṭna. Qaṭna-Studien, vol. x.
 
Cocquyt C., Kusber W.H. & Jahn R. 2018: Epithemia hirudiniformis and related taxa within the subgenus Rhopalodiella subg. nov. in comparison to Epithemia subg. Rhopalodia stat nov. (Bacillariophyceae) from East Africa. Cryptogamie Algologie 39: 35-62.
 
Rimet F., Abarca N., Bouchez A., Kusber W-H., Jahn R., Kahlert M., Keck F., Kelly M., Mann D.G., Piuz A., Trobajo R., Tapolczai K., Vasselon V. & Zimmermann J. 2018: The potential of high throughput sequencing (HTS) of natural samples as a source of primary taxonomic information for reference libraries of diatom barcodes. Fottea, 18 (1). In press. Doi 10.5507/fot.2017.013.
 
Florian Leese, Agnès Bouchez, Kessy Abarenkov, Florian Altermatt, Ángel Borja, Kat Bruce, Torbjørn Ekrem, Fedor Čiampor Jr, Zuzana Čiamporová-Zaťovičová, Filipe O. Costa, Sofia Duarte, Vasco Elbrecht, Diego Fontaneto, Alain Franc, Matthias F. Geiger, Daniel Hering, Maria Kahlert, Belma Kalamujić Stroil, Martyn Kelly, Emre Keskin, Igor Liska, Patricia Mergen, Kristian Meissner, Jan Pawlowski, Lyubomir Penev, Yorick Reyjol, Ana Rotter, Dirk Steinke, Bas van der Wal, Simon Vitecek, Jonas Zimmermann & Alexander M. Weigand (2018). Why We Need Sustainable Networks Bridging Countries, Disciplines, Cultures and Generations for Aquatic Biomonitoring 2.0: A Perspective Derived From the DNAqua-Net COST Action. in: Next Generation Biomonitoring: Part 1, Volume 58, 1st Edition, ed. D. Bohan, A. Dumbrell, G. Woodward & M. Jackson.
 
2017
 
Bochardt N, Schiefelbein U, Abarca N, Boy J, Mikhailyuk T, Sipman H & Karsten U (2017): Diversity of algae and lichens in biological soil crusts of Ardley and King George Island, Antarctica. Antarctic Science. doi:10.1017/S0954102016000638
 
Zimmermann, J. & Hürlimann, J. (2017). Umwelt-DNA (eDNA) – Molekularbiologie erobert Arten-, Gewässer- und Naturschutz. Wasser Energie Luft 109. Jahrgang (2) (September 2017).
 
Zimmermann J. & Hürlimann J. (2017). Umwelt-DNA (eDNA) – die revolutionierte Artensuche. Fauna Focus 35 (August 2017).
 
Mora D., Carmona J., Jahn R., Zimmermann J., Abarca N. 2017: Epilithic diatom communities of selected streams from the Lerma-Chapala Basin, Central Mexico, with the description of two new species. PhytoKeys 88: 39-69. doi: 10.3897/phytokeys.88.14612
 
Marić Pfannkuchen D., Godrijan J., Smodlaka Tanković M., Baričević A., Kužat N., Djakovac T., Pustijanac E., Jahn R. & Pfannkuchen M. 2017: The Ecology of One Cosmopolitan, One Newly Introduced and One Occasionally Advected Species from the Genus Skeletonema in a Highly Structured Ecosystem, the Northern Adriatic. Microb Ecol. DOI 10.1007/s00248-017-1069-9.
 
Jahn R., Kusber W.-H., Cocquyt C.2017: Differentiating Iconella from Surirella (Bacillariophyceae): typifying four Ehrenberg names and a preliminary checklist of the African taxa. - PhytoKeys 82: 73-112.https://doi.org/10.3897/phytokeys.82.13542
 
Jahn R., Abarca N., Gemeinholzer B., Mora D., Skibbe O., Kulikovskiy M., Gusev E., Kusber W.-H. & Zimmermann J. 2017: Planothidium lanceolatum and Planothidium frequentissimum reinvestigated with molecular methods and morphology: four new species and the taxonomic importance of the sinus and cavum. - Diatom Research, 32(1): 75-107. http://dx.doi.org/10.1080/0269249X.2017.1312548
 
Kusber W.-H., Jahn R. & Korsch H. 2017: Rote Liste und Gesamtartenliste der Armleuchteralgen (Characeae) von Berlin. - In: Der Landesbeauftragte für Naturschutz und Landschaftspflege / Senatsverwaltung für Umwelt, Verkehr und Klimaschutz (Hrsg.): Rote Listen der gefährdeten Pflanzen, Pilze und Tiere von Berlin, 22 S. doi: 10.14279/depositonce-5843
 
Rudolph K., Jahn R. & Kusber W.-H. 2017: Rote Liste und Gesamtartenliste der limnischen Rotalgen (Rhodophyta) und Braunalgen (Phaeophyceae) von Berlin. - In: Der Landesbeauftragte für Naturschutz und Landschaftspflege / Senatsverwaltung für Umwelt, Verkehr und Klimaschutz (Hrsg.): Rote Listen der gefährdeten Pflanzen, Pilze und Tiere von Berlin, 16 S. doi: 10.14279/depositonce-5842
 
Cocquyt C., Taylor J.C. & Kusber W.-H. 2017: Reinvestigation of African Surirella taxa (Bacillariophyta) described by B.J. Cholnoky with some remarks on digitization of diatom types. - Fottea 17(1): 34-56
 
Kretschmann J., Žerdoner Čalasan A., Kusber W.-H. & Gottschling M. 2017: Still curling after all these years: Glenodinium apiculatum Ehrenb. (Peridiniales, Dinophyceae) repeatedly found at its type locality in Berlin (Germany). Systematics and Biodiversity.
 
Kusber W.-H. 2017: Phytoflagellaten-Studien im Naturschutzgebiet „Aland-Elbe-Niederung“ mit Erstfunden für Sachsen-Anhalt. - Mitteilungen zur floristischen Kartierung in Sachsen-Anhalt 22: 3–10.
 
Kusber W.-H., Cantonati M. & Lange-Bertalot H. 2017: Validation of five diatom novelties published in “Freshwater Benthic Diatoms of Central Europe” and taxonomic treatment of the neglected species Tryblionella hantzschiana. - Phytotaxa 328(1): 90-94.
 
Suhrbier L., Kusber W.-H., Tschöpe O., Güntsch A. & Berendsohn W.G. 2017: AnnoSys—implementation of a generic annotation system for schema-based data using the example of biodiversity collection data. - Database (Oxford) 2017 (1) bax018. https://doi.org/10.1093/database/bax018
 
Tillmann U., Hoppenrath M., Gottschling M., Kusber W.-H. & Elbrächter M. 2017: Plate pattern clarification of the marine dinophyte Heterocapsa triquetra sensu Stein (Dinophyceae) collected at the Kiel Fjord (Germany). - J. Phycol. 20 pp. DOI: 10.1111/jpy.12584

2016

Florian Leese, Florian Altermatt, Agnès Bouchez, Torbjørn Ekrem, Daniel Hering, Kristian Meissner, Patricia Mergen, Jan Pawlowski, Jeremy Jay Piggott, Frédéric Rimet, Dirk Steinke, Pierre Taberlet, Alexander M. Weigand, Kessy Abarenkov, Pedro Beja, Lieven Bervoets, Snaedís Björnsdóttir, Pieter Boets, Angela Boggero, Atle Magnar Bones, Ángel Borja, Kat Bruce, Vojislava Bursić, Jens Carlsson, Fedor Čiampor, Zuzana Čiamporová-Zatovičová, Eric Coissac, Filipe Costa, Marieta Costache, Simon Creer, Zoltán Csabai, Kristy Deiner, Ángel DelValls, Stina Drakare, Sofia Duarte, Tina Eleršek, Stefano Fazi, Cene Fišer, Jean-François Flot, Vera Fonseca, Diego Fontaneto, Michael Grabowski, Wolfram Graf, Jóhannes Guðbrandsson, Micaela Hellström, Yaron Hershkovitz, Peter Hollingsworth, Bella Japoshvili, John I. Jones, Maria Kahlert, Belma Kalamujic Stroil, Panagiotis Kasapidis, Martyn G Kelly, Mary Kelly-Quinn, Emre Keskin, Urmas Kõljalg, Zrinka Ljubešić, Irena Maček, Elvira Mächler, Andrew Mahon, Marketa Marečková, Maja Mejdandzic, Georgina Mircheva, Matteo Montagna, Christian Moritz, Vallo Mulk, Andreja Naumoski, Ion Navodaru, Judit Padisák, Snæbjörn Pálsson, Kristel Panksep, Lyubomir Penev, Adam Petrusek, Martin Andreas Pfannkuchen, Craig R Primmer, Baruch Rinkevich, Ana Rotter, Astrid Schmidt-Kloiber, Pedro Segurado, Arjen Speksnijder, Pavel Stoev, Malin Strand, Sigitas Šulčius, Per Sundberg, Michael Traugott, Costas Tsigenopoulos, Xavier Turon, Alice Valentini, Berry van der Hoorn, Gábor Várbíró, Marlen Ines Vasquez Hadjilyra, Javier Viguri, Irma Vitonytė, Alfried Vogler, Trude Vrålstad, Wolfgang Wägele, Roman Wenne, Anne Winding, Guy Woodward, Bojana Zegura, Jonas Zimmermann (DNAqua-Net consortium 2016). DNAqua-Net: Developing new genetic tools for bioassessment and monitoring of aquatic ecosystems in Europe. Research Ideas & Outcomes 2: e11321.

Zimmermann J.Kusber W.-H., Droege G. & Jahn R. 2016: GBOL2 – Increasing the Accessibility of eDNA Barcoding Data. GGBN Newsletter 5: 7-8.
 
Barkworth M. E., Watson M., Barrie F. R., Belyaeva I. V., Chung R. C. K., Dašková J., Davidse G., Dönmez A. A., Doweld A. B., Dressler S., Flann C., Gandhi K., Geltman D., Glen H. F., Greuter W., Head M. J., Jahn R., Janarthanam M. K., Katinas L., Kirk P. M., Klazenga N., Kusber W.-H., Kvaček J., Malécot V., Mann D. G., Marhold K., Nagamasu H., Nicolson N., Paton A., Patterson D. J., Price M. J., Prud’homme van Reine W., Schneider C. W., Sennikov A., Smith G. F., Stevens P. F., Yang Z.-L., Zhang X.-C. & Zuccarello G. C. 2016: (276–279) Proposals to provide for registration of new names and nomenclatural acts. - Taxon 65 (3): 656-658.
 
Barkworth M. E., Watson M., Barrie F. R., Belyaeva I. V., Chung R. C. K., Dašková J., Davidse G., Dönmez A. A., Doweld A. B., Dressler S., Flann C., Gandhi K., Geltman D., Glen H. F., Greuter W., Head M. J., Jahn R., Janarthanam M. K., Katinas L., Kirk P. M., Klazenga N., Kusber W.-H., Kvaček J., Malécot V., Mann D. G., Marhold K., Nagamasu H., Nicolson N., Paton A., Patterson D. J., Price M. J., Prud’homme van Reine W., Schneider C. W., Sennikov A., Smith G. F., Stevens P. F., Yang Z.-L., Zhang X.-C. & Zuccarello G. C. 2016: Report of the Special Committee on Registration of Algal and Plant Names (including fossils). – Taxon 65 (3): 670–672.

2015

Enke N., Kunze R., Pustahija F., Glöckner G., Zimmermann J., Oberländer J., Kamari G. & Siljak-Yakovlev S. 2015: Genome Size Shifts: Karyotype Evolution in Crepis section Neglectoides (Asteraceae). Plant Biology 17 (4): 775-786.
 
Zimmermann J., Glöckner G., Jahn R.Enke N. & Gemeinholzer B. 2015: Metabarcoding vs. morphological identification to assess diatom diversity in environmental studies. Molecular Ecology Resources 15 (3): 526-542. 

Ognjanova-Rumenova N, Buczko K, Wojtal A, Jahn R (2015) Staurosirella rhombus (Ehrenberg), Ognjanova-Rumenova, Buczko, Wojtal, R.Jahn, comb. nov. – Typification, morphology and biostratigraphic significance. Phytotaxa 218 (3): 279-288.

Silva JW, Jahn R, Ludwig TAV, Hinz F, Menezes M (2015) Typification and taxonomic status re-evaluation of 15 taxon names within the species complex Cymbella affinis/tumidula/turgidula (Cymbellaceae, Bacillariophyta). Phytokeys, , doi: 10.3897/phytokeys.53.4782.

Stachura-Suchoples K, Enke N, Schlie C, Schaub I, Karsten U & Jahn R (2015) Contribution towards a morphological and
molecular taxonomic reference library of benthic marine diatoms from two Arctic fjords on Svalbard (Norway). Polar Biology. DOI 10.1007/s00300-015-1683-2.

Brinkmann N, Hodač L, Mohr K I, Alena Hodačová A, Jahn R, Ramm J, Hallmann C, Arp G & Friedl T (2015): Cyanobacteria and diatoms in biofilms of two karstic streams in Germany and changes of their communities along calcite saturation gradients. Geomicrobiology Journal. DOI:10.1080/01490451.2014.901438.

Abarca N. & Regine Jahn R. (eds) 2015: IUBS 2015 – Frontiers in Unified Biology - Abstracts and Program of the 32nd IUBS General Assembly and Conference 14–16 December 2015, Berlin, Germany. BGBM Press. http://dx.doi.org/10.3372/IUBS2015

2014

Woelfel J, Schoknecht A, Schaub I, Enke N, Schumann & Karsten U (2014) Growth and photosynthesis characteristics of three benthic diatoms from the brackish southern Baltic Sea in relation to varying environmental conditions. Phycologia 53: 639-651.

CocquytC & Jahn R (2014): A re-investigation of Otto Müller´s Cymatopleura taxa (Bacillariophyta) from East Africa. Plant Ecology & Evolution 147 (3): 412-425.

Zimmermann J, Glöckner G, Jahn R, Enke N & Gemeinholzer B (2014): Metabarcoding vs. morphological identification to assess diatom diversity in environmental studies. Molecular Ecology Resources DOI: 10.1111/1755-0998.12336. http://onlinelibrary.wiley.com/doi/10.1111/1755-0998.12336/abstract

Zimmermann J,  Abarca N, Enke N, Skibbe O, Kusber WH, Jahn R (2014) Taxonomic Reference Libraries for Environmental Barcoding: a Best Practice Example from Diatom Research. PlosOne DOI: 10.1371/journal.pone.0108793. http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0108793

Kistenich S, Dressler M, Zimmermann J., Hübener, T, Bastrop R, Jahn R (2014) An investigation into the morphology and genetics of Cyclotella comensis and closely related taxa. Diatom Research 29 (4) 423-440.

Jahn R, Kusber WH & Lange-Bertalot H (2014): Typification and taxonomy of Hantzschia amphioxys (Ehrenberg) Grunow (Bacillariophyta): type of the genus name Hantzschia Grunow. Nova Hedwigia Beiheft 143 103-110.

Abarca N, Jahn R, Zimmermann J, Enke N (2014) Does the Cosmopolitan Diatom Gomphonema parvulum (Kützing) Kützing have a Biogeography? PLoS ONE 9(1): e86885. doi:10.1371/journal.pone.0086885

2013

Bock C, Luo W, Kusber W-H, Hegewald E, Pažoutová M & Krienitz L (2013) Classification of crucigenoid algae: phylogenetic position of the reinstated genus Lemmermannia, Tetrastrum spp. Crucigenia tetrapedia, and C. lauterbornii (Trebouxiophyceae, Chlorophyta). – J. Phycol. 49: 329-339. http://dx.doi.org/10.1111/jpy.12039

Cocquyt C, Jüttner I & Kusber W-H (2013) Reinvestigation of West African Surirellaceae (Bacillariophyta) described by Woodhead and Tweed from Sierra Leone. Diatom Research 28: 121-129. http://dx.doi.org/10.1080/0269249X.2012.752411

Van de Vijver B, Moravcová A, Kusber W-H & Neustupa J (2013) Analysis of the type material of Pinnularia divergentissima (Grunow in Van Heurck) Cleve (Bacillariophyceae). – Fottea 13: 1-14. http://fottea.czechphycology.cz/_contents/F13-1-2013-01.pdf

Romero OE & Jahn R (2013) Typification of Cocconeis lineata and Cocconeis euglypta. Diatom Research 28 (2) 175-184.

2012

Pawlowski J, Audic S, Adl S, Bass D, Belbahri L, Berney C, Bowser S, Cepicka I, Decelle J, Dunthorn M, Fiore-Donno AM, Gile GH, Holzmann M, Jahn R, Jirku M, Keeling PJ, Kostka M, Kudryavtsev A, Lara E, Lukeš J, Mann DG, Mitchell EAD, Nitsche F, Romeralo M, Saunders GW, Simpson AGB, Smirnov AV, Spouge JL, Stern RF, Stoeck T, Zimmermann J, Schindel D, de Vargas C (2012) CBOL Protist Working Group: Barcoding Eukaryotic Richness beyond the Animal, Plant, and Fungal Kingdoms. PLoS Biol 10(11): e1001419. doi:10.1371/journal.pbio.1001419.

Silva WJ, Jahn R, Menezes M (2012) Diatoms from Brazil: the taxa recorded by Christian Gottfried Ehrenberg. PhytoKeys 18: 19–37. doi: 10.3897/phytokeys.18.3653.

Cocquyt, C., de Haan, M., Jahn, R. & Hinz, F. 2012: Nitzschia epiphytica, Nitzschia epiphyticoides and Nitzschia pseudepiphytica (Bacillariophyta), three small diatoms from East and Central Africa. – Phycologia 51: 126-134.

2011

Mayama, S., Katoh, K, Ohmori, H, Seino, S, Osaki, H, Julius, M, Lee, J.H., Cheong, Ch., Lobo, E.A, Witkowski, A., Srivibool, R., Muangphra, P., Jahn, R. and Kulikovskiy, M., Hamilton, P.B., Gao, Y.-H., Ector, L. 2011: Progress toward the Construction of an International Web-based Educational System Featuring Improved SimRiver for Understanding of River Environments. – Asian Journal of Biology Education 5: 2-14.

Kapetanović, T., Jahn, R., Redžić, S. & Carić, M. 2011: Diatoms in a poor fen of Bijambare protected landscape, Bosnia & Herzogovina. – Nova Hedwigia 93: 125-151.

Zimmermann, J., Jahn, R., Gemeinholzer, B. 2011: Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols. – Organisms Diversity & Evolution 11: 173-192.

2010

Cocquyt, C. & Kusber, W.-H. 2010: Reinvestigation of West African Surirellaceae (Bacillariophyta) described by Foged from Ghana. – Nova Hedwigia 91: 111-136.

Sar, E.A., Sunesen, I., Jahn, R. 2010: Coscinodiscus perforatus revisited and compared to Coscinodiscus radiatus (Bacillariophyta). – Phycologia 49:514-524.

2009

Stachura-Suchoples, K., Jahn, R. 2009: Middle Miocene record of Pliocaenicus changbaiense from Chanbai County (Jilin Province, China). – Acta Botanica Croatica 68 (2): 33-42.

Jahn, R., Kusber, W.-H. & Romero, O.E. 2009: Cocconeis pediculus Ehrenberg and C. placentula Ehrenberg: Typification and taxonomy. – Fottea 9: 275-288.

Jahn, R. & Kusber, W.-H. 2009: A Key to Diatom Nomenclature. – Diatom Research 24: 101-111.

Buczko, K., Wojtal, A.Z. & Jahn, R. 2009: Kobayasiella species of the Carpathian basin: morphology, taxonomy and description of K. tintinnus spec. nov. – Diatom Research 24: 1-21.

Buczko, K., Wojtal, A.Z. & Jahn, R. 2009: Kobayasiella species of the Carpathian basin: morphology, taxonomy and description of K. tintinnus spec. nov. – Diatom Research 24: 1-21.

Kusber, W.-H. & Jahn, R. 2009: The last chapter of the Discoplea story. – Studi Trent. Sci. Nat. 84: 105-110.

Kusber, W.-H., Zippel, E., Kelbert, P., Holetschek, J., Güntsch, A. & Berendsohn, W. G. 2009: From cleaning the valves to cleaning the data: Case studies using diatom biodiversity data on the Internet (GBIF, BioCASE). – Studi Trent. Sci. Nat. 84: 111-122.